MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-275

Family name MIR-275 (all species)
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues
Orthologues Aae-Mir-275  Aga-Mir-275  Bge-Mir-275  Csc-Mir-275  Dan-Mir-275  Dlo-Mir-275  Dma-Mir-275  Dme-Mir-275  Dmo-Mir-275  Dpu-Mir-275  Dsi-Mir-275  Dya-Mir-275  Hme-Mir-275  Isc-Mir-275  Lpo-Mir-275-P3  Lpo-Mir-275-P4-v1  Lpo-Mir-275-P5  Lpo-Mir-275-P6  Lpo-Mir-275-P7  Tca-Mir-275 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(GpalI1)		 Scaffold315: 241102-241168 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-275)		 Mir-275 Scaffold315: 241102-241168 [+] Ensembl
Mir-305 Scaffold315: 241261-241320 [+] Ensembl
Seed CAGGUAC
Precursor
(pre-Mir +30nt flank)		 
UUUUUUUCUUCAGUUUAGUCUAGCACUCUGCGCGCUAAUCAGUGACCGGGGCUGUGAAUUGUAUAAAACCCAAGUCAGGUACCUGAAGUAGCGCGCGAAGUCUUAGGCACCGACAACAUGCAAGAUA
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Structure
        10          20        30         40        50        60   
UUUUUUUCUUCAGUUUA--      C   C         A-|   UG   GG    GUGAAUUGU 
                   GUCUAG ACU UGCGCGCUA  UCAG  ACC  GGCU         \
                   CGGAUU UGA GCGCGCGAU  AGUC  UGG  CUGA         A
AUAGAACGUACAACAGCCA      C   A         GA^   CA   A-    ACCCAAAAU 
     120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
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Star sequence

Gpa-Mir-275_5p*
mirBase accessionNone
Sequence 
0- CGCGCUAAUCAGUGACCGGGGCU -23
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Mature sequence

Gpa-Mir-275_3p
mirBase accessionNone
Sequence 
44- UCAGGUACCUGAAGUAGCGCGCG -67
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