MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-15-P1a

Family name MIR-15 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-15-P1b  Cmi-Mir-15-P1c  Cmi-Mir-15-P2a  Cmi-Mir-15-P2b  Cmi-Mir-15-P2c 
Orthologues Ami-Mir-15-P1a  Bta-Mir-15-P1a  Cfa-Mir-15-P1a  Cin-Mir-15-P1  Cja-Mir-15-P1a  Cli-Mir-15-P1a  Cpi-Mir-15-P1a  Cpo-Mir-15-P1a  Dno-Mir-15-P1a  Dre-Mir-15-P1a1  Dre-Mir-15-P1a2  Eca-Mir-15-P1a  Ete-Mir-15-P1a  Gga-Mir-15-P1a  Gja-Mir-15-P1a  Gmo-Mir-15-P1a2  Hsa-Mir-15-P1a  Laf-Mir-15-P1a  Lch-Mir-15-P1a  Loc-Mir-15-P1a  Mal-Mir-15-P1a2  Mdo-Mir-15-P1a  Mml-Mir-15-P1a  Mmr-Mir-15-P1a  Mmu-Mir-15-P1a  Mun-Mir-15-P1a  Neu-Mir-15-P1a  Oan-Mir-15-P1a  Ocu-Mir-15-P1a  Pab-Mir-15-P1a  Rno-Mir-15-P1a  Sha-Mir-15-P1a  Spt-Mir-15-P1a  Sto-Mir-15-P1a  Tgu-Mir-15-P1a  Tni-Mir-15-P1a2  Xla-Mir-15-P1a3  Xla-Mir-15-P1a4  Xtr-Mir-15-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI636198.1: 77762-77820 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P1a)		 Mir-15-P2a KI636198.1: 77560-77624 [-] UCSC Ensembl
Mir-15-P1a KI636198.1: 77762-77820 [-] UCSC Ensembl
Seed AGCAGCA
Precursor
(pre-Mir +30nt flank)		 
UUAUCCAACUGUGAAGACUUUGUGGUGAUGUAGCAGCACAUAAUGGUUUGUGAGUUGUAUGGAGAUACAGGCCAUGUUGUGCUGCCAUAUGAACACAAGAGUUUAAUCUGUUUAUUUCC
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Structure
        10          20        30        40        50         
UUAUCCAACUGUGAAGAC--|     GUG    A        UA          AGUUGU 
                    UUUGUG   AUGU GCAGCACA  AUGGUUUGUG      \
                    GAACAC   UAUA CGUCGUGU  UACCGGACAU      A
CCUUUAUUUGUCUAAUUUGA^     AAG    C        UG          AGAGGU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-15-P1a_5p
mirBase accessionNone
Sequence 
0- UAGCAGCACAUAAUGGUUUGUG -22
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Star sequence

Cmi-Mir-15-P1a_3p*
mirBase accessionNone
Sequence 
37- CAGGCCAUGUUGUGCUGCCAUA -59
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