MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-87-P1

Family name MIR-87 (all species)
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-87-P2 
Orthologues Bge-Mir-87-P1  Cbr-Mir-87-o1  Cel-Mir-87-o1  Csc-Mir-87-P1k1  Csc-Mir-87-P1k2  Csc-Mir-87-P1l  Cte-Mir-87-P1  Dgr-Mir-87-P1  Dlo-Mir-87-P1  Gsp-Mir-87  Hru-Mir-87-P1  Isc-Mir-87-P1  Lgi-Mir-87-P1  Lpo-Mir-87-P1c  Lpo-Mir-87-P1d  Lpo-Mir-87-P1e  Lpo-Mir-87-P1f  Lpo-Mir-87-P1g  Lpo-Mir-87-P1h  Lpo-Mir-87-P1i  Lpo-Mir-87-P1j  Mgi-Mir-87-P1  Ofu-Mir-87-P1  Pau-Mir-87-P1  Pve-Mir-87-P1  Sne-Mir-87  Snu-Mir-87-P1  Tca-Mir-87-P1 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(LinAna_1.0)		 LFEI01000460: 49414-49469 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-87-P1)		 Mir-87-P1 LFEI01000460: 49414-49469 [+] Ensembl
Mir-87-P2 LFEI01000460: 49823-49883 [+] Ensembl
Seed UGAGCAA
Precursor
(pre-Mir +30nt flank)		 
AGCCAAUAAAGAGAAACUCGUCUGCCUGACGUGCCUGAAAUUUUGACUCAAGCCUGAUAGUAAGGUGAGCAAAGUUUCAGGUGUGUCAGUCUGACGGUCUGACAACUGUGUGGGAU
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Structure
        10          20        30        40        50         
AGCCAAUAAAGAGAAAC--|    UGC      UG            A   AA    GAU 
                   UCGUC   CUGACG  CCUGAAAUUUUG CUC  GCCU   \
                   GGCAG   GACUGU  GGACUUUGAAAC GAG  UGGA   A
UAGGGUGUGUCAACAGUCU^    UCU      GU            -   --    AUG 
    110       100        90        80        70           60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To To
Star sequence

Lan-Mir-87-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUGCCUGAAAUUUUGACUCAAGCCU -25
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Mature sequence

Lan-Mir-87-P1_3p
mirBase accessionNone
Sequence 
34- GUGAGCAAAGUUUCAGGUGUGU -56
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