MirGeneDB 3.0
MirGeneDB ID

Pve-Mir-87-P1

Family name MIR-87 (all species)
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues Pve-Mir-87-P2 
Orthologues Bge-Mir-87-P1  Cbr-Mir-87-o1  Cel-Mir-87-o1  Csc-Mir-87-P1k1  Csc-Mir-87-P1k2  Csc-Mir-87-P1l  Cte-Mir-87-P1  Dgr-Mir-87-P1  Dlo-Mir-87-P1  Gsp-Mir-87  Hru-Mir-87-P1  Isc-Mir-87-P1  Lan-Mir-87-P1  Lgi-Mir-87-P1  Lpo-Mir-87-P1c  Lpo-Mir-87-P1d  Lpo-Mir-87-P1e  Lpo-Mir-87-P1f  Lpo-Mir-87-P1g  Lpo-Mir-87-P1h  Lpo-Mir-87-P1i  Lpo-Mir-87-P1j  Mgi-Mir-87-P1  Ofu-Mir-87-P1  Pau-Mir-87-P1  Sne-Mir-87  Snu-Mir-87-P1  Tca-Mir-87-P1 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Pve_genome_chr_only)		 Pve_Chr1: 171050014-171050072 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-87-P1)		 Mir-87-P2 Pve_Chr1: 171018507-171018565 [-] Ensembl
Mir-87-P1 Pve_Chr1: 171050014-171050072 [-] Ensembl
Seed UGAGCAA
Precursor
(pre-Mir +30nt flank)		 
AUUCUGGAAGAAGGGAUAUAUUUGUCUGGUGUGCCUGAAAUUUUGUCUCAAGCCUGUGUGCAGAAAGGUGAGCAAAGUUUCAGGUAUAUUAGAUGGAUAGUUAAUCAUCAUCUUCAUCU
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Structure
        10          20        30        40        50        60
AUUCUGGAAGAAGGGAUA--|   UG                     U   AA    GUGU 
                    UAUU  UCUGGUGUGCCUGAAAUUUUG CUC  GCCU    G
                    AUAG  AGAUUAUAUGGACUUUGAAAC GAG  UGGA    C
UCUACUUCUACUACUAAUUG^   GU                     -   --    AAGA 
       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
To
Star sequence

Pve-Mir-87-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUGCCUGAAAUUUUGUCUCAAGCCU -25
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Mature sequence

Pve-Mir-87-P1_3p
mirBase accessionNone
Sequence 
37- GUGAGCAAAGUUUCAGGUAUAU -59
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