MirGeneDB 3.0
MirGeneDB ID

Hru-Mir-87-P1

Family name MIR-87 (all species)
Species Red Abalone (Haliotis rufescens)
MiRBase ID
Paralogues Hru-Mir-87-P2 
Orthologues Bge-Mir-87-P1  Cbr-Mir-87-o1  Cel-Mir-87-o1  Csc-Mir-87-P1k1  Csc-Mir-87-P1k2  Csc-Mir-87-P1l  Cte-Mir-87-P1  Dgr-Mir-87-P1  Dlo-Mir-87-P1  Gsp-Mir-87  Isc-Mir-87-P1  Lan-Mir-87-P1  Lgi-Mir-87-P1  Lpo-Mir-87-P1c  Lpo-Mir-87-P1d  Lpo-Mir-87-P1e  Lpo-Mir-87-P1f  Lpo-Mir-87-P1g  Lpo-Mir-87-P1h  Lpo-Mir-87-P1i  Lpo-Mir-87-P1j  Mgi-Mir-87-P1  Ofu-Mir-87-P1  Pau-Mir-87-P1  Pve-Mir-87-P1  Sne-Mir-87  Snu-Mir-87-P1  Tca-Mir-87-P1 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_023055435.1_xgHalRufe1.0.p_genomic_plus_traces)		 JALGQA010000010.1: 16274339-16274397 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-87-P1)		 Mir-87-P2 JALGQA010000010.1: 16273794-16273851 [-] UCSC Ensembl
Mir-87-P1 JALGQA010000010.1: 16274339-16274397 [-] UCSC Ensembl
Seed UGAGCAA
Precursor
(pre-Mir +30nt flank)		 
GUUAUCUCCCCUGUUUAGUGUUUGUUGGCUGUGCCUAAGAUUUUGGCUCAAACCUGCAGAUAACAAGGUGAGCAAAGUUUCAGGUGCAUUUAACAGAUAUACUAACAUCAGACAGAUCU
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Structure
        10          20        30        40        50        60
GUUAUCUCCCCUGUUUA--|          C  UG   A        G   AA    GCAG 
                   GUGUUUGUUGG UG  CCU AGAUUUUG CUC  ACCU    A
                   UAUAGACAAUU AC  GGA UUUGAAAC GAG  UGGA    U
UCUAGACAGACUACAAUCA^          U  GU   C        -   --    ACAA 
       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To To
Star sequence

Hru-Mir-87-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUGCCUAAGAUUUUGGCUCAAACCU -25
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Mature sequence

Hru-Mir-87-P1_3p
mirBase accessionNone
Sequence 
37- GUGAGCAAAGUUUCAGGUGCAU -59
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