MirGeneDB 3.0
MirGeneDB ID

Pau-Mir-87-P1

Family name MIR-87 (all species)
Species Horseshoe worm (Phoronis australis)
MiRBase ID
Paralogues Pau-Mir-87-P2 
Orthologues Bge-Mir-87-P1  Cbr-Mir-87-o1  Cel-Mir-87-o1  Csc-Mir-87-P1k1  Csc-Mir-87-P1k2  Csc-Mir-87-P1l  Cte-Mir-87-P1  Dgr-Mir-87-P1  Dlo-Mir-87-P1  Gsp-Mir-87  Hru-Mir-87-P1  Isc-Mir-87-P1  Lan-Mir-87-P1  Lgi-Mir-87-P1  Lpo-Mir-87-P1c  Lpo-Mir-87-P1d  Lpo-Mir-87-P1e  Lpo-Mir-87-P1f  Lpo-Mir-87-P1g  Lpo-Mir-87-P1h  Lpo-Mir-87-P1i  Lpo-Mir-87-P1j  Mgi-Mir-87-P1  Ofu-Mir-87-P1  Pve-Mir-87-P1  Sne-Mir-87  Snu-Mir-87-P1  Tca-Mir-87-P1 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Phoronis_australis_GCA_002633005)		 NMRA01000440.1: 155956-156014 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-87-P1)		 Mir-87-P2 NMRA01000440.1: 155778-155836 [-] Ensembl
Mir-87-P1 NMRA01000440.1: 155956-156014 [-] Ensembl
Seed UGAGCAA
Precursor
(pre-Mir +30nt flank)		 
UUUGCACAUUGUAUUCCCCUCGUUACUUGGACACUUGACACUUUGACUCAAGCCUGCUUCUGACAAGGUGAGCAAAGUUUCAGGUGUGUUAGUGAUUGAGAUUGUCAACCAUAUGCGUC
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Structure
        10         20         30        40        50        60
UUUGCACAUUGUAUUCCC-   -|     UGG        C      A   AA    GCUU 
                   CUC GUUACU   ACACUUGA ACUUUG CUC  GCCU    C
                   GAG UAGUGA   UGUGGACU UGAAAC GAG  UGGA    U
CUGCGUAUACCAACUGUUA   U^     UUG        U      -   --    ACAG 
       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Pau-Mir-87-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACACUUGACACUUUGACUCAAGCCU -25
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Mature sequence

Pau-Mir-87-P1_3p
mirBase accessionNone
Sequence 
37- GUGAGCAAAGUUUCAGGUGUGU -59
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