MirGeneDB 3.0
MirGeneDB ID

Oan-Mir-130-P1a

Family name MIR-130 (all species)
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-130c
Paralogues Oan-Mir-130-P1b  Oan-Mir-130-P1c  Oan-Mir-130-P2a  Oan-Mir-130-P2b  Oan-Mir-130-P3b 
Orthologues Aca-Mir-130-P1a  Ami-Mir-130-P1a  Cli-Mir-130-P1a  Cmi-Mir-130-P1a  Cpi-Mir-130-P1a  Dre-Mir-130-P1a1  Dre-Mir-130-P1a2  Gga-Mir-130-P1a  Gja-Mir-130-P1a  Gmo-Mir-130-P1a1  Gmo-Mir-130-P1a2  Lch-Mir-130-P1a  Loc-Mir-130-P1a  Mal-Mir-130-P1a1  Mal-Mir-130-P1a2  Mdo-Mir-130-P1a  Mun-Mir-130-P1a  Pbv-Mir-130-P1a  Sha-Mir-130-P1a  Spt-Mir-130-P1a  Sto-Mir-130-P1a  Tgu-Mir-130-P1a  Tni-Mir-130-P1a2  Xla-Mir-130-P1a3  Xla-Mir-130-P1a4  Xtr-Mir-130-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041748.1: 23340935-23340990 [-]
Clustered miRNAs
(< 50kb from Mir-130-P1a)		 Mir-130-P2a NC_041748.1: 23340756-23340817 [-]
Mir-130-P1a NC_041748.1: 23340935-23340990 [-]
Seed AGUGCAA
Precursor
(pre-Mir +30nt flank)		 
GAGGGGGCUGCCGGAUGGCCGCCGGCCGGAGCCCUUUUGCCGUUGUGCUACUGAGCGUGAGGAGCAGUGCAAUGGUAAAAGGGCAUCGGCUGGCGGGGUCCCCGCCGGGCCGCCGC
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Structure
        10          20        30        40        50       
GAGGGGGCUGCCGGAUGG--|         GA               UG  A  GAGC 
                    CCGCCGGCCG  GCCCUUUUGCCGUUG  CU CU    G
                    GGCGGUCGGC  CGGGAAAAUGGUAAC  GA GA    U
CGCCGCCGGGCCGCCCCUGG^         UA               GU  C  GGAG 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce He Ki Te
Star sequence

Oan-Mir-130-P1a_5p*
mirBase accessionMIMAT0006907
Sequence 
0- GCCCUUUUGCCGUUGUGCUACU -22
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Mature sequence

Oan-Mir-130-P1a_3p
mirBase accessionMIMAT0006908
Sequence 
34- CAGUGCAAUGGUAAAAGGGCAU -56
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