MirGeneDB 3.0
MirGeneDB ID

Oan-Mir-875

Family name MIR-875 (all species)
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-875
Paralogues
Orthologues Aca-Mir-875  Ami-Mir-875  Bta-Mir-875  Cfa-Mir-875  Cja-Mir-875  Cli-Mir-875  Cpi-Mir-875  Ebu-Mir-875  Eca-Mir-875  Ete-Mir-875  Gja-Mir-875  Hsa-Mir-875  Laf-Mir-875  Mdo-Mir-875  Mml-Mir-875  Mmr-Mir-875  Mmu-Mir-875  Mun-Mir-875  Ocu-Mir-875  Pab-Mir-875  Pbv-Mir-875  Pma-Mir-875  Rno-Mir-875  Sha-Mir-875  Spt-Mir-875 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041731.1: 62097582-62097638 [-]
Clustered miRNAs
(< 50kb from Mir-875)		 Mir-599 NC_041731.1: 62097434-62097493 [-]
Mir-875 NC_041731.1: 62097582-62097638 [-]
Seed AUACCUC
Precursor
(pre-Mir +30nt flank)		 
UUAGUGAAAUUUCACCAAGUUUAGUGGUACAAUACCUCAGUCUUAUCAGGUGUUCUUUCAAUUCACCUGGCAAUACUGAGGUUGUGUCUCACUGAACACAGACUUCGUGGCUUCUGU
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Structure
        10          20        30        40        50        
UUAGUGAAAUUUCACCAA--|       GU   AU        C  AU      UUCUU 
                    GUUUAGUG  ACA  ACCUCAGU UU  CAGGUG     \
                    CAAGUCAC  UGU  UGGAGUCA AA  GUCCAC     U
UGUCUUCGGUGCUUCAGACA^       UC   GU        U  CG      UUAAC 
     110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce He Ki Te
Mature sequence

Oan-Mir-875_5p (predicted)
mirBase accessionMIMAT0006830
Sequence 
0- AAUACCUCAGUCUUAUCAGGUG -22
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Star sequence

Oan-Mir-875_3p* (predicted)
mirBase accessionMIMAT0006831
Sequence 
35- CCUGGCAAUACUGAGGUUGUGU -57
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