MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-30-P2a

Family name MIR-30 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-30b
Paralogues Bta-Mir-30-P1a  Bta-Mir-30-P1b  Bta-Mir-30-P1d  Bta-Mir-30-P2b  Bta-Mir-30-P2d 
Orthologues Aca-Mir-30-P2a  Ami-Mir-30-P2a  Cfa-Mir-30-P2a  Cja-Mir-30-P2a  Cmi-Mir-30-P2a  Cpi-Mir-30-P2a  Cpo-Mir-30-P2a  Dno-Mir-30-P2a  Dre-Mir-30-P2a  Eca-Mir-30-P2a  Ete-Mir-30-P2a  Gga-Mir-30-P2a  Gja-Mir-30-P2a  Gmo-Mir-30-P2a  Hsa-Mir-30-P2a  Laf-Mir-30-P2a  Lch-Mir-30-P2a  Loc-Mir-30-P2a  Mal-Mir-30-P2a  Mdo-Mir-30-P2a  Mml-Mir-30-P2a  Mmr-Mir-30-P2a  Mmu-Mir-30-P2a  Mun-Mir-30-P2a  Neu-Mir-30-P2a  Oan-Mir-30-P2a  Ocu-Mir-30-P2a  Pab-Mir-30-P2a  Pbv-Mir-30-P2a  Rno-Mir-30-P2a  Sha-Mir-30-P2a  Spt-Mir-30-P2a  Sto-Mir-30-P2a  Tgu-Mir-30-P2a  Tni-Mir-30-P2a  Xla-Mir-30-P2a1  Xla-Mir-30-P2a2  Xtr-Mir-30-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037341.1: 7045583-7045642 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-30-P2a)		 Mir-30-P1a NC_037341.1: 7041143-7041204 [+] UCSC Ensembl
Mir-30-P2a NC_037341.1: 7045583-7045642 [+] UCSC Ensembl
Seed GUAAACA
Precursor
(pre-Mir +30nt flank)		 
AGUCCUGCUUUAAACCAAGUUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAACACACGAGUCGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGACUGUCAGCCAUUAACACG
Get precursor sequence
Structure
        10        20          30        40         50         
AGUCCUGCUUUAAACCAAGUUU--|     CAU          U  A-       GUAACA 
                        UCAGUU   GUAAACAUCC AC  CUCAGCU      C
                        AGUCGA   CAUUUGUAGG UG  GGGUCGG      A
GCACAAUUACCGACUGUCAGGUUC^     CUU          -  GA       CUGAGC 
.       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-30-P2a_5p
mirBase accessionMIMAT0003547
Sequence 
0- UGUAAACAUCCUACACUCAGCU -22
Get sequence
Proposed targets TargetScanVert: bta-miR-30b-5p
Star sequence

Bta-Mir-30-P2a_3p*
mirBase accessionMIMAT0012534
Sequence 
38- CUGGGAGGUGGAUGUUUACUUC -60
Get sequence
Proposed targets TargetScanVert: bta-miR-30b-3p